PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_014473-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family WRKY
Protein Properties Length: 281aa    MW: 31988.5 Da    PI: 5.8488
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_014473-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.51.5e-2979137259
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                    +D ++WrKYGqK++kgs++pr+YYrC++  gC+++k+ver+++d ++++itY+++Hnh+
  NNU_014473-RA  79 SDFWSWRKYGQKPIKGSPYPRGYYRCSTCkGCSARKQVERCRTDASMLIITYTSTHNHP 137
                    699***********************9877****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.3E-3172139IPR003657WRKY domain
SuperFamilySSF1182909.94E-2676139IPR003657WRKY domain
SMARTSM007743.4E-3478138IPR003657WRKY domain
PROSITE profilePS5081130.9479139IPR003657WRKY domain
PfamPF031061.6E-2480137IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MREDSGVRMN MLQEGEEEAK EIHKRSTMNS PCEKTDSKTS KENKTENQAS KRRKVIQKTV  60
VTVRIEENAG GQKNEGPPSD FWSWRKYGQK PIKGSPYPRG YYRCSTCKGC SARKQVERCR  120
TDASMLIITY TSTHNHPGPD VHTNPNQGQP ILSTQPTVEE KLLPSTPQQQ QLEEPIIASD  180
EDTSKDHLQH LQSSHNCSQL DIITNQEENP STVDEQEKTH NPLSFLFHEK PLSFSPLMTF  240
STPKSEENDF FDELEELPIS SSFTSIMRSS SFDERILILP S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-16801391977Probable WRKY transcription factor 4
2lex_A3e-16801391977Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010267989.10.0PREDICTED: probable WRKY transcription factor 69
TrEMBLD7U2J01e-106D7U2J0_VITVI; Putative uncharacterized protein
STRINGVIT_07s0005g01520.t011e-105(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.22e-38WRKY DNA-binding protein 69